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Density plot of memory usage by Picard for duplicate removal. The... |  Download Scientific Diagram
Density plot of memory usage by Picard for duplicate removal. The... | Download Scientific Diagram

MycoSNP: A Portable Workflow for Performing Whole-Genome Sequencing  Analysis of Candida auris | SpringerLink
MycoSNP: A Portable Workflow for Performing Whole-Genome Sequencing Analysis of Candida auris | SpringerLink

Picard MarkDuplicates with dovetail reads · Issue #416 · broadinstitute/ picard · GitHub
Picard MarkDuplicates with dovetail reads · Issue #416 · broadinstitute/ picard · GitHub

Alignment File Processing | Variant Analysis
Alignment File Processing | Variant Analysis

ChIP-Seq Alignment and QC : Basepair Support
ChIP-Seq Alignment and QC : Basepair Support

GenePattern
GenePattern

Chapter 3 MarkDuplicates | A practical introduction to GATK 4 on Biowulf  (NIH HPC)
Chapter 3 MarkDuplicates | A practical introduction to GATK 4 on Biowulf (NIH HPC)

Alignment File Processing | Variant Analysis
Alignment File Processing | Variant Analysis

Proceedings of the 5th International Conference on Bioinformatics Research  and Applications: A Study on Optimizing MarkDuplicate
Proceedings of the 5th International Conference on Bioinformatics Research and Applications: A Study on Optimizing MarkDuplicate

Getting started with Picard
Getting started with Picard

Chapter 3 MarkDuplicates | A practical introduction to GATK 4 on Biowulf  (NIH HPC)
Chapter 3 MarkDuplicates | A practical introduction to GATK 4 on Biowulf (NIH HPC)

Minimal differences between Picard, SAMTools, and no duplicate removal... |  Download Table
Minimal differences between Picard, SAMTools, and no duplicate removal... | Download Table

Variant (SNP) calling - an introduction (with a worked example, using  FreeBayes / GATK in Galaxy) | PPT
Variant (SNP) calling - an introduction (with a worked example, using FreeBayes / GATK in Galaxy) | PPT

Longitudinal detection of circulating tumor DNA
Longitudinal detection of circulating tumor DNA

Duplicate read removal and insert cover. Duplicate reads removal for a)...  | Download Scientific Diagram
Duplicate read removal and insert cover. Duplicate reads removal for a)... | Download Scientific Diagram

Alignment File Processing | Variant Analysis
Alignment File Processing | Variant Analysis

Question about deduplication with UMI-tools
Question about deduplication with UMI-tools

Comparison of speed, memory peak and processing results of different... |  Download Scientific Diagram
Comparison of speed, memory peak and processing results of different... | Download Scientific Diagram

Frontiers | UMIc: A Preprocessing Method for UMI Deduplication and Reads  Correction
Frontiers | UMIc: A Preprocessing Method for UMI Deduplication and Reads Correction

Should we run MarkDuplicates on PCR-Free Libraries made using PCR-Free Kits  to take care of Optical Duplicates ? – GATK
Should we run MarkDuplicates on PCR-Free Libraries made using PCR-Free Kits to take care of Optical Duplicates ? – GATK

picard/src/main/java/picard/sam/markduplicates/MarkDuplicates.java at  master · broadinstitute/picard · GitHub
picard/src/main/java/picard/sam/markduplicates/MarkDuplicates.java at master · broadinstitute/picard · GitHub

Identifying duplicate reads in RNA-Seq data using Picard.MarkDuplicates in  GenePattern - YouTube
Identifying duplicate reads in RNA-Seq data using Picard.MarkDuplicates in GenePattern - YouTube

Bug] When removing duplicates, MarkDuplicates does not remove unmapped  records whose mate is a duplicate · Issue #451 · broadinstitute/picard ·  GitHub
Bug] When removing duplicates, MarkDuplicates does not remove unmapped records whose mate is a duplicate · Issue #451 · broadinstitute/picard · GitHub